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| Sr. | Work in Progress for Publication in 2010 | Status |
| 1. | SATTSOC: Sequence Database and Analysis Tool for the Terminal Sugars of Oligosaccharide Chain. Authors: Nasir-ud-Din, Wajahat M. Qazi, Afshan Kaleem, Asma Butt, Mehwish Tahir, Zeeshan Iqbal, Ramzan Manwar, Muhammad Rehan, Abad Ali Shah, Daniel Hoessli, Muhammad Iqbal Choudhary, M. Saleem Khan Nucleic Acids Research. 2010; (impact factor: 7.479). Submitted |
Submitted |
| 2. | MAPRes 2.0: Mining association rules among preferred residues utilizing amino acid properties in the vicinity of post-translational modification sites Authors: Wajahat M Qazi, Ishtiaq Ahmad, Daniel C Hoessli, Amina Shabbir, Khalil Ahmed, Nasir-Ud Din Proteomic (impact factor: 5.479). In review |
Submitted |
| 3. | Machine consciousness and general intelligence: From classical to quantum computational paradigm Authors: Wajahat M Qazi, Khalil Ahmed, Atifa Athar, Anwaar Saeed, Umer Farooq Computer Journal (impact factor: 1.0). Submitted |
Submitted |
| 4. | Progress in Quantum Neural Networks and Consciousness Authors: Wajahat M Qazi, Kyriakos Sgarbas, Muhayyuddin, Tariq Mahmood To be submitted in Experimental and Theoretical Journal of Artificial Intelligence (impact factor: 0.3) |
Manuscript in preparation |
| Sr. | Monograph/Book Publications | |||
| 1. | Machine Learning in Bioinformatics: An Approach for Protein Sequence Analysis | |||
| Authors: Publishers: |
Wajahat M Qazi and Khalil Ahmed VDM Publishing |
Year: ISBN: |
2010 978-3639253726 |
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| Sr. | List of Publications (Journals) | HEC Approved | Impact Factor |
| 1. | GEARS: Genetic Algorithm based machine learning technique to develop prediction model Authors: Wajahat M Qazi, Ishtiaq Ahmad, Daniel C Hoessli, M. Saleem Khan, Khalil Ahmed Abdul Rauf Shakoori, , Nasir-Ud Din Pakistan J. Zool. In press/2010 |
W | 0.185 |
| 2. | Phosphoproteome sequence analysis and significance: Mining association patterns around phosphorylation sites utilizing MAPRes Authors: Ishtiaq Ahmad, Abid Mehmood, Ahmed Khurshid, Wajahat M Qazi, Daniel C Hoessli, Evelyne Walker-Nasir, Abdul Rauf Shakoori, Nasir-Ud Din Journal of cellular biochemistry. 07/2009 |
International | 3.540 |
| 3. | Theoretical Framework to Learn Opponent’s Mixed Strategy: Playing “Paper, Scissor, Rock” by Evolving Adaptive Neural Networks Authors: M. Saleem Khan, Wajahat M. Qazi, Salman Lodhi Pakistan Journal of Science. 03/2009; 61(1):32-36. |
Y | |
| 4. | MAPRes: an efficient method to analyze protein sequence around post-translational modification sites Authors: Ishtiaq Ahmad, Daniel C Hoessli, Wajahat M Qazi, Ahmed Khurshid, Abid Mehmood, Evelyne Walker-Nasir, Munir Ahmad, Abdul R Shakoori, , Nasir-Ud Din Journal of cellular biochemistry. 08/2008; 104(4):1220-31. |
International | 3.540 |
| 5. | MAPRes: Mining association patterns among preferred amino acid residues in the vicinity of amino acids targeted for post-translational modifications Authors: Ishtiaq Ahmad, Wajahat M Qazi, Ahmed Khurshid, Munir Ahmad, Daniel C Hoessli, Iffat Khawaja, M Iqbal Choudhary, Abdul R Shakoori, , Nasir-Ud Din Proteomics. 06/2008; 8(10):1954-8. |
International | 5.479 |
| 6. | In silico modulation of apoptotic Bcl-2 proteins by mistletoe lectin-1: functional consequences of protein modifications Authors: Tasneem A Khwaja, Tayyaba Wajahat, Ishtiaq Ahmad, Daniel C Hoessli, Evelyne Walker-Nasir, Afshan Kaleem, Wajahat M Qazi, Abdul R Shakoori, Nasir-Ud Din Journal of cellular biochemistry. 03/2008; 103(2):479-91. |
International | 3.540 |
| 7. | Preference Estimation of Amino Acids in the Vicinity of EGFR Acceptor Phosphotyrosine using Computational Method Authors: Wajahat M. Qazi, Khalil Ahmad, Tayyaba Wajahat Journal of Natural Sciences and Mathematics. 10/2007; 47((1 & 2)):33-41. |
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| 8. | Consensus Sequences as Target for Phosphorylation of Amino Acids in Phosphoproteins: Statistical Computing Analysis Authors: Wajahat M. Qazi, Munir Ahmed, Daniel C. Hoessli, Ishtiaq Ahmad, Iffat Khawaja, Tayyaba Wajahat, Afshan Kaleem, Evelyne Walker-Nasir, Nazim Rehman, A.R. Shakoori and Nasir-ud-Din Pakistan J. Zool. 03/2006; 38(55-63). |
W | 0.185 |
| 9. | Mammalian Epidermal Growth Factor Receptor: Role of Phosphorylation and Glycosylation Authors: Tayyaba Wajahat, Afshan Kaleem, Ishtiaq Ahmad, Daniel C. Hoessli, Evelyne Walker-Nasir, Wajahat M. Qazi, Muhammad Saleem, A.R. Shakoori and Nasir-ud-Din. Pakistan J. Zool. . 03/2006; 38(85-92). |
W | 0.185 |
| 10. | Somatic Cell Cycle Regulation By Histone H3 Modifications: Action of OGT and Kinases Authors: Afshan Kaleem, Ishtiaq Ahmad, Tayyaba Wajahat, Daniel C. Hoessli, Evelyne Walker-Nasir, Syed Altaf Hussain, Wajahat M. Qazi, A.R. Shakoori and Nasir-ud-Din Pakistan J. Zool. 03/2006; 38:137-144. |
W | 0.185 |
| 11. | Regulation of apoptosis by histon H2B modifications Authors: Afshan Kaleem, Tayyaba Wajahat, Ishtiaq Ahmad, Daniel C. Hoessli, Evelyne Walker-Nasir, Wajahat M. Qazi, A.R. Shakoori and Nasir-ud-Din Pakistan J. Zool. 03/2006; 38(305-312). |
W | 0.185 |
| 12. | Prediction of Tyr residues involved in autophosphorylation of FLT3 positive leukemias Authors: Ishtiaq Ahmad, Daniel C. Hoessli, Evelyne Walker-Nasir, Wajahat M. Qazi, A.R. Shakoori and Nasir-ud-Din Pakistan J. Zool. 11/2005; 37(289-292). |
W | 0.185 |
| 13. | Acoustics of Emotion Detection for Task-Dependent Human Corpus in Second Language Speakers Authors: Wajahat M. Qazi, Irfan M. Ahmed and S. M. Baais - e - Alam Sci. Int. 05/2005; 16(4):257-260. |
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| Sr. | Conference Publications and Presentations |
| 1. | Cybernetics Approach towards the Development of Cognitive Model for Machine Consciousness with Quantum Neural Correlates Authors: Wajahat M. Qazi, Khalil Ahmed, Yousaf Saeed, Atifa Athar, M.A. Saeed 2010 International Conference on Intelligence and Information Technology, Pakistan; 2010 |
| 2. | Designing Synergy of Emotional Dynamics for Agency Authors: Atifa Athar, Khalil Ahmed, Wajahat M. Qazi, M. A. Saeed, Yousaf Saeed 2010 International Conference on Intelligence and Information Technology, Pakistan; 2010 |
| 3. | A Dynamic Solution for Encryption Challenges in Ubiquitous Environment Authors: M.A. Saeed, Khalil Ahmed, Wajahat M. Qazi, Atifa Athar, Yousaf Saeed 2010 International Conference on Intelligence and Information Technology, Pakistan; 2010 |
| 4. | An Empirical Study for Performance Analysis of IPv6 Networks and Tunnel Broker Mechanism Authors: Yousaf Saeed, Khalil Ahmed, Wajahat M. Qazi, Atifa Athar, M.A. Saeed 2010 International Conference on Intelligence and Information Technology, Pakistan; 2010 |
| 5. | Review of Applications of Intelligent Methods in Physics Authors: Adeel Akram, Rana Usman Ali, Muhayyuddin Gillani, Khalil Ahmed, M. Saleem Khan, Wajahat M. Qazi, Khalil Ahmed, Tayyaba Wajahat and Nasir-ud-Din 4th International Conference of Statistical Sciences, University of Gujrat. Gujrat, Lahore; 05/2008 |
| 6. | Web Visualization For Architecture Recovery Authors: Wajahat M. Qazi, Nadim Asif International Conference of Software Engineering, University of Lahore, Lahore, Pakistan; 04/2006 |
| 7. | Role of Phosphorylation and Glycosylation in Epidermal Growth Factor Receptor Authors: Afshan Kaleem, Ishtiaq Ahmed, Wajahat M. Qazi, Tayyaba Wajahat and Nasir-ud-Din 8th Islamic Country Conference on Statistical Sciences at National University of Emerging and Computer Sciences, Lahore, Pakistan; 12/2005 |
| 8. | Functional Consequences of Phosphorylation and Glycosylation of Oct-2: DNA Binding Transcription Factor Authors: Ishtiaq Ahmed, Daniel C. Hoessli, Evelyne Walker-Nasir, Wajahat M. Qazi, A. R. Shakoori and Nasir-ud-Din 8th Islamic Country Conference on Statistical Sciences at National University of Emerging and Computer Sciences, Lahore, Pakistan; 12/2005 |
| 9. | Effect of Mistletoe Lectine 1 on Pro- and Anti- Apoptic Proteins of Bcl-2 Family Authors: Tayyaba Wajahat, Ishtiaq Ahmed, Wajahat M. Qazi, Afshan Kaleem, Muhammad Saleem, Khawaja Tasneem Afzal and Nasir-ud-Din 8th Islamic Country Conference on Statistical Sciences at National University of Emerging and Computer Sciences, Lahore Pakistan; 12/2005 |
| 10. | Database Analysis of Amino Acid Distribution Around Phosphorylated and Non-Phosphorylated Sites using ProteinExplorer2005 Authors: Wajahat M. Qazi, Ishtiaq Ahmed, Munir Ahmed, Iffat Khawaja, Tayyaba Wajahat, Afshan Kaleem and Nasir-ud-Din 8th Islamic Country Conference on Statistical Sciences , National University of Emerging and Computer Sciences, Lahore, Pakistan; 12/2005 |
| 11. | Study of Prosodic Cues of Emotions for Second Language Speakers Using Computational Methods Authors: Wajahat M. Qazi, Irfan M. Ahmed and S. M. Baais - e - Alam International Conference on Computational Intelligence, Turkey; 12/2004 |
| Sr. | Conference: Oral Presentations and Abstracts |
| 1. | Evolving prediction models using genetic algorithm by learning protein sequence data and association rules Authors: Wajahat M. Qazi, Ishtiaq Ahmed, A. R. Shakoori and Nasir-ud-Din 30th Pakistan Congress of Zoology (International), University of Agriculture, Faisalabad; 03/2010 |
| 2. | Prediction of EGFR Modification Potential Using Neural Networks and MAPRes Authors: Wajahat M. Qazi and Khalil Ahmed 5th International Conference of Statistical Sciences: Mathematics, Statistics and Applications, National College Business Administration and Economics, Lahore, Pakistan; 01/2009 |
| 3. | Data Analysis Tool for Biophysicists and Biochemists to Analyze PTM Sites Authors: Wajahat M. Qazi, Khalil Ahmed, Tayyaba Wajahat and Nasir-ud-Din (2008) 4th International Conference of Statistical Sciences, University of Gujrat, Gujrat, Pakistan; 05/2008 |
| 4. | GEARS: Evolving Classifier using Genetic Algorithm and Ensemble Learning by Inducing Sequence Data and Preference Associative Rules Authors: Wajahat M. Qazi, Khalil Ahmad, Tayyaba Wajahat, M. Saleem Khan and Nasir-ud-Din 6th National Research Conference, ZABIST, Islamabad, Pakistan; 01/2008 |
| 5. | Analysis of Phospho.ELM using MAPRes Authors: Wajahat M. Qazi, A.R. Shakoori and Nasir-ud-Din First International Conference on the Role of Chemistry & Biochemistry in the National Development, University of Balochistan, Quetta, Lahore; 04/2007 |
| 6. | Rules Required for Phosphorylating Tyrosine Using As A Model Kinase EGFR Utilizing AME Authors: Wajahat M. Qazi, A.R. Shakoori and Nasir-ud-Din International Symposium on Nano Chemistry: Chemistry, Biochemistry, Molecular Biology & Bioinformatics of Enzymes, The University of Punjab; 09/2006 |
| Sr. | Conference : Poster Presentations and Abstracts |
| 1. | Prediction of modification potential of phospho-tyrosine utilizing neural networks with MAPRes Rule Induction Authors: Muhammad Rehan, Nauman Ahmed, Wajahat M. Qazi, Ishtiaq Ahmad and Nasir-ud-Din 30th Pakistan Congress of Zoology (International), University of Agriculture, Faisalabad; 03/2010 |
| 2. | MAPRes 1.1: Preference and property based association rule mining algorithm for post translational modification data of proteins Authors: Amina Shabbir, Umair Tariq, Wajahat M. Qazi, Ishitaq Ahmad and Nasir-ud-Din 30th Pakistan Congress of Zoology (International), University of Agriculture, Faisalabad; 03/2010 |